This randomized controlled trial compared 40% urea pretreatment versus fractional Er:YAG laser pretreatment before methylene blue photodynamic therapy (MB/PDT) for moderate toenail onychomycosis. At 40-week follow-up, the urea pretreatment group achieved a 60% complete cure rate versus 30% in the laser group, though the laser group reported higher patient satisfaction. Both pretreatments were safe and effective, but urea provided superior medium-term outcomes.