In three adolescents with autoimmune polyendocrine syndrome type-1 (APS-1), off-label ruxolitinib treatment led to broad clinical improvement across multiple autoimmune manifestations, including alopecia, autoimmune hepatitis, hypoparathyroidism, and diabetes insipidus, with sustained effects over 25–31 months. Adrenal insufficiency was the only manifestation that did not respond. These findings suggest that JAK/STAT signaling plays a key role in APS-1 pathogenesis and that JAK inhibitors may offer a novel therapeutic strategy, though larger prospective trials are needed.